chore(release): 2.20.1-dev.1 [skip ci]

## [2.20.1-dev.1](https://github.com/revanced/revanced-cli/compare/v2.20.0...v2.20.1-dev.1) (2023-03-02)

### Bug Fixes

* change permission of gradlew ([6787267](6787267c67))
* correctly word option descriptions ([6050d12](6050d122e6))

.github/config.yml

@@ -1,2 +0,0 @@
-firstPRMergeComment: >
-  Thank you for contributing to ReVanced. Join us on [Discord](https://revanced.app/discord) if you want to receive a contributor role.

.github/workflows/release.yml

@@ -23,20 +23,17 @@ jobs:
           # https://github.com/cycjimmy/semantic-release-action#private-packages
           persist-credentials: false
           fetch-depth: 0
-      - name: Cache
-        uses: actions/cache@v3
+      - name: Setup JDK
+        uses: actions/setup-java@v3
         with:
-          path: |
-            ${{ runner.home }}/.gradle/caches
-            ${{ runner.home }}/.gradle/wrapper
-            .gradle
-            build
-            node_modules
-          key: ${{ runner.os }}-gradle-npm-${{ hashFiles('**/*.gradle*', '**/gradle-wrapper.properties', 'package-lock.json') }}
-      - name: Build with Gradle
-        env:
-          GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-        run: ./gradlew clean --no-daemon
+          java-version: '17'
+          distribution: 'zulu'
+          cache: gradle
+      - name: Setup Node.js
+        uses: actions/setup-node@v3
+        with:
+          node-version: "18"
+          cache: 'npm'
       - name: Setup semantic-release
         run: npm install
       - name: Release

.github/workflows/update-documentation.yml

@@ -9,7 +9,6 @@ jobs:
   trigger:
     runs-on: ubuntu-latest
     name: Dispatch event to documentation repository
-    if: github.ref == 'refs/heads/main'
     steps:
       - uses: peter-evans/repository-dispatch@v2
         with:

.releaserc

@@ -7,13 +7,7 @@
     }
   ],
   "plugins": [
-    [
-      "@semantic-release/commit-analyzer", {
-        "releaseRules": [
-          { "type": "build", "scope": "revanced-patcher", "release": "patch" }
-        ]
-      }
-    ],
+    "@semantic-release/commit-analyzer",
     "@semantic-release/release-notes-generator",
     "@semantic-release/changelog",
     "gradle-semantic-release-plugin",

CHANGELOG.md

@@ -1,104 +1,10 @@
-## [2.21.5](https://github.com/revanced/revanced-cli/compare/v2.21.4...v2.21.5) (2023-07-01)
-
-## [2.21.5-dev.2](https://github.com/revanced/revanced-cli/compare/v2.21.5-dev.1...v2.21.5-dev.2) (2023-07-01)
-
-## [2.21.5-dev.1](https://github.com/revanced/revanced-cli/compare/v2.21.4...v2.21.5-dev.1) (2023-06-27)
-
-## [2.21.4](https://github.com/revanced/revanced-cli/compare/v2.21.3...v2.21.4) (2023-06-21)
-
-
-### Bug Fixes
-
-* remove duplicate options entries. ([d0fc886](https://github.com/revanced/revanced-cli/commit/d0fc8864286adc2677f91a319a11a90272c1001d))
-
-## [2.21.4-dev.1](https://github.com/revanced/revanced-cli/compare/v2.21.3...v2.21.4-dev.1) (2023-06-18)
-
-
-### Bug Fixes
-
-* remove duplicate options entries. ([d0fc886](https://github.com/revanced/revanced-cli/commit/d0fc8864286adc2677f91a319a11a90272c1001d))
-
-## [2.21.3](https://github.com/revanced/revanced-cli/compare/v2.21.2...v2.21.3) (2023-06-12)
-
-## [2.21.3-dev.1](https://github.com/revanced/revanced-cli/compare/v2.21.2...v2.21.3-dev.1) (2023-06-07)
-
-## [2.21.2](https://github.com/revanced/revanced-cli/compare/v2.21.1...v2.21.2) (2023-05-24)
-
-## [2.21.2-dev.2](https://github.com/revanced/revanced-cli/compare/v2.21.2-dev.1...v2.21.2-dev.2) (2023-05-15)
-
-## [2.21.2-dev.1](https://github.com/revanced/revanced-cli/compare/v2.21.1...v2.21.2-dev.1) (2023-05-07)
-
-## [2.21.1](https://github.com/revanced/revanced-cli/compare/v2.21.0...v2.21.1) (2023-05-06)
-
-## [2.21.1-dev.1](https://github.com/revanced/revanced-cli/compare/v2.21.0...v2.21.1-dev.1) (2023-05-06)
-
-# [2.21.0](https://github.com/revanced/revanced-cli/compare/v2.20.2...v2.21.0) (2023-05-04)
-
-
-### Bug Fixes
-
-* **tests:** set order of tests ([2ef48af](https://github.com/revanced/revanced-cli/commit/2ef48af1b339ab729a05d69cb0c8c1ee1e3ab486))
-* use working JADB dependency version ([#222](https://github.com/revanced/revanced-cli/issues/222)) ([da2c918](https://github.com/revanced/revanced-cli/commit/da2c91874d5623402febfcc0677ada3d648565e1))
-
-
-### Features
-
-* add appreciation message for new contributors ([6962fc2](https://github.com/revanced/revanced-cli/commit/6962fc2f4c0f0c96e88a823be64f8ebd1312ee17))
-
-# [2.21.0-dev.1](https://github.com/revanced/revanced-cli/compare/v2.20.2...v2.21.0-dev.1) (2023-05-04)
-
-
-### Bug Fixes
-
-* **tests:** set order of tests ([2ef48af](https://github.com/revanced/revanced-cli/commit/2ef48af1b339ab729a05d69cb0c8c1ee1e3ab486))
-* use working JADB dependency version ([#222](https://github.com/revanced/revanced-cli/issues/222)) ([da2c918](https://github.com/revanced/revanced-cli/commit/da2c91874d5623402febfcc0677ada3d648565e1))
-
-
-### Features
-
-* add appreciation message for new contributors ([6962fc2](https://github.com/revanced/revanced-cli/commit/6962fc2f4c0f0c96e88a823be64f8ebd1312ee17))
-
-## [2.20.2](https://github.com/revanced/revanced-cli/compare/v2.20.1...v2.20.2) (2023-04-30)
-
-
-### Bug Fixes
-
-* correct spelling mistake ([31fb316](https://github.com/revanced/revanced-cli/commit/31fb3166d922ae1f568f52e44cbe726dd1c891a4))
-
-## [2.20.2-dev.1](https://github.com/revanced/revanced-cli/compare/v2.20.1...v2.20.2-dev.1) (2023-04-03)
-
-
-### Bug Fixes
-
-* correct spelling mistake ([31fb316](https://github.com/revanced/revanced-cli/commit/31fb3166d922ae1f568f52e44cbe726dd1c891a4))
-
-## [2.20.1](https://github.com/revanced/revanced-cli/compare/v2.20.0...v2.20.1) (2023-03-14)
-
-
-### Bug Fixes
-
-* correctly word option descriptions ([ac3a8f6](https://github.com/revanced/revanced-cli/commit/ac3a8f66f77a7218974465eebbfc78a536b76d51))
-
-## [2.20.1-dev.1](https://github.com/revanced/revanced-cli/compare/v2.20.0...v2.20.1-dev.1) (2023-03-05)
-
-
-### Bug Fixes
-
-* correctly word option descriptions ([ac3a8f6](https://github.com/revanced/revanced-cli/commit/ac3a8f66f77a7218974465eebbfc78a536b76d51))
-
-## [2.20.1-dev.1](https://github.com/revanced/revanced-cli/compare/v2.20.0...v2.20.1-dev.1) (2023-03-03)
-
-
-### Bug Fixes
-
-* correctly word option descriptions ([ac3a8f6](https://github.com/revanced/revanced-cli/commit/ac3a8f66f77a7218974465eebbfc78a536b76d51))
-
 ## [2.20.1-dev.1](https://github.com/revanced/revanced-cli/compare/v2.20.0...v2.20.1-dev.1) (2023-03-02)
 
 
 ### Bug Fixes
 
-* correctly word option descriptions ([ac3a8f6](https://github.com/revanced/revanced-cli/commit/ac3a8f66f77a7218974465eebbfc78a536b76d51))
+* change permission of gradlew ([6787267](https://github.com/revanced/revanced-cli/commit/6787267c67c8829bd18acc530474d29a88f84f9b))
+* correctly word option descriptions ([6050d12](https://github.com/revanced/revanced-cli/commit/6050d122e65abd5bb27efdca77d0187b50e3df83))
 
 # [2.20.0](https://github.com/revanced/revanced-cli/compare/v2.19.0...v2.20.0) (2023-01-18)
 

build.gradle.kts

@@ -1,5 +1,5 @@
 plugins {
-    kotlin("jvm") version "1.8.10"
+    kotlin("jvm") version "1.7.0"
     id("com.github.johnrengelman.shadow") version "7.1.2"
 }
 
@@ -23,28 +23,17 @@ repositories {
 }
 
 dependencies {
-    implementation("org.jetbrains.kotlin:kotlin-reflect:1.8.20-RC")
+    implementation(kotlin("reflect"))
 
-    implementation("app.revanced:revanced-patcher:11.0.3")
-    implementation("info.picocli:picocli:4.7.1")
-    implementation("com.github.revanced:jadb:2531a28109") // updated fork
-    implementation("com.android.tools.build:apksig:8.1.0-alpha09")
+    implementation("app.revanced:revanced-patcher:7.0.0")
+    implementation("info.picocli:picocli:4.7.0")
+    implementation("com.github.revanced:jadb:master-SNAPSHOT") // updated fork
+    implementation("com.android.tools.build:apksig:7.2.2")
     implementation("org.bouncycastle:bcpkix-jdk15on:1.70")
-    implementation("com.fasterxml.jackson.module:jackson-module-kotlin:2.14.+")
-    testImplementation("org.jetbrains.kotlin:kotlin-test:1.8.20-RC")
-}
-
-kotlin {
-    jvmToolchain(11)
+    implementation("cc.ekblad:4koma:1.1.0")
 }
 
 tasks {
-    test {
-        useJUnitPlatform()
-        testLogging {
-            events("PASSED", "SKIPPED", "FAILED")
-        }
-    }
     build {
         dependsOn(shadowJar)
     }

docs/0_prerequisites.md

@@ -1,15 +1,17 @@
 # 💼 Prerequisites
 
-To use ReVanced CLI, you will need to fulfill certain requirements.
+To use the ReVanced CLI, you will need to fulfill certain requirements.
 
 ## 🤝 Requirements
 
-- Java SDK 11 (Azul JDK or OpenJDK)
-- [Android Debug Bridge (adb)](https://developer.android.com/studio/command-line/adb) if you want to deploy the patched APK file on your device
-- An ABI other than ARMv7 such as x86 or x86-64 (or a custom AAPT binary that supports ARMv7)
+- [Android Debug Bridge (adb)](https://developer.android.com/studio/command-line/adb), the command-line tool that lets
+  you communicate with a device (optional).
+- A x86/x86_64 host (or a custom AAPT binary for your architecture)
+- Zulu OpenJDK 17
+- An APK file (e.g. YouTube v17.49.37 or YouTube Music v5.36.51)
 
 ## ⏭️ Whats next
 
-The next section will show, how to use [ReVanced CLI](https://github.com/revanced/revanced-cli).
+The next section will show, how to use the [ReVanced CLI](https://github.com/revanced/revanced-cli).
 
-Continue: [🛠️ Using ReVanced CLI](1_usage.md)
+Continue: [🛠️ Using the ReVanced CLI](1_usage.md)

docs/1_usage.md

@@ -1,76 +1,76 @@
-# 🛠️ Using ReVanced CLI
+# 🛠️ Using the ReVanced CLI
 
-Learn how to ReVanced CLI.
+Lean how to use the ReVanced CLI.
 
-## ⚡ Setup ADB
+## ⚡ Setup (optional)
 
-1. Ensure that ADB is working
+1. Make sure your device is connected
 
    ```bash
    adb shell exit
    ```
 
-   If you want to deploy the patched APK file on your device by mounting it on top of the original APK file, you will need root access. This is optional.
+   If you plan to use the root variant, check if you have root access
 
    ```bash
    adb shell su -c exit
    ```
 
-2. Get the name of your device
+2. Copy the ADB device name
 
    ```bash
    adb devices
    ```
 
-## 🔨 Using ReVanced CLI
+## 🔨 ReVanced CLI Usage
 
-- ### ⚙️ Show all available options for ReVanced CLI
+- ### Show all available options for the ReVanced CLI
 
   ```bash
   java -jar revanced-cli.jar -h
   ```
 
-- ### 📃 List all available patches from supplied patch bundles
+- ### List all available patches from supplied patch bundles
 
   ```bash
-  java -jar revanced-cli.jar
-   -b revanced-patches.jar \
-   -l
+  java -jar revanced-cli.jar \
+      -b revanced-patches.jar \
+      -l
   ```
 
-- ### 💉 Use ReVanced CLI to patch an APK file but deploy without root permissions
-
-  This will deploy the patched APK file on your device by installing it.
+- ### Use the ReVanced CLI without root permissions
 
   ```bash
   java -jar revanced-cli.jar \
    -a input.apk \
-   -o patched-output.apk \
-   -b revanced-patches.jar \
-   -d device-name
+   -c \
+   -o unpatched-output.apk \
+   -b revanced-patches.jar
   ```
 
-- ### 👾 Use ReVanced CLI to patch an APK file but deploy with root permissions
-
-  This will deploy the patched APK file on your device by mounting it on top of the original APK file.
+- ### Mount the patched application with root permissions over the installed application
 
   ```bash
-  adb install input.apk
+  adb install input.apk # make sure the same version is installed
   java -jar revanced-cli.jar \
-   -a input.apk \
-   -o patched-output.apk \
-   -b revanced-patches.jar \
-   -e vanced-microg-support \
-   -d device-name \
-   --mount
+      -a input.apk \
+      -c \
+      -d device-name \
+      -o patched-output.apk \
+      -b revanced-patches.jar \
+      -e microg-support \
+      --mount
   ```
 
-  > **Note**: Some patches from [ReVanced Patches](https://github.com/revanced/revanced-patches) also require [ReVanced Integrations](https://github.com/revanced/revanced-integrations). Supply them with the option `-m`. ReVanced Patcher will merge ReVanced Integrations automatically, depending on if the supplied patches require them.
-
-- ### ⚙️ Supply options to patches using ReVanced CLI
-
-  Some patches provide options. Currently, ReVanced CLI will generate and consume an `options.json` file at the location that is specified in `-o`. If the option is not specified, the options file will be generated in the current working directory.
-  
-  The options file contains all options from supplied patch bundles.
-
-  > **Note**: The `options.json` file will be generated at the first time you use ReVanced CLI to patch an APK file for now. This will be changed in the future.
+> **Note**:
+>
+> - If you want to exclude patches, you can use the option `-e`. In the case of YouTube, you can exclude
+    the `microg-support` patch from [ReVanced Patches](https://github.com/revanced/revanced-patches) with the
+    option `-e microg-support` when mounting for example.
+>
+> - Some patches from [ReVanced Patches](https://github.com/revanced/revanced-patches) also might require
+    [ReVanced Integrations](https://github.com/revanced/revanced-integrations). Supply them with the option `-m`.
+    > The integrations will be merged, if necessary automatically, if supplied.
+>
+> - If you supplied a device with the option `-d`, the patched application will be automatically installed on the
+    device.

docs/README.md

@@ -1,8 +1,8 @@
 # 💻 Documentation and guides of ReVanced CLI
 
-This documentation explains how to use [ReVanced CLI](https://github.com/revanced/revanced-cli).
+This documentation explain, how to use the [ReVanced CLI](https://github.com/revanced/revanced-cli).
 
 ## 📖 Table of contents
 
 1. [💼 Prerequisites](0_prerequisites.md)
-2. [🛠️ Using ReVanced CLI](1_usage.md)
+2. [🛠️ Using the ReVanced CLI](1_usage.md)

gradle.properties

@@ -1,2 +1,2 @@
 kotlin.code.style = official
-version = 2.21.5
+version = 2.20.1-dev.1

gradle/wrapper/gradle-wrapper.properties

@@ -1,5 +1,5 @@
 distributionBase=GRADLE_USER_HOME
 distributionPath=wrapper/dists
-distributionUrl=https\://services.gradle.org/distributions/gradle-8.1.1-all.zip
+distributionUrl=https\://services.gradle.org/distributions/gradle-7.4.2-all.zip
 zipStoreBase=GRADLE_USER_HOME
 zipStorePath=wrapper/dists

src/main/kotlin/app/revanced/cli/command/MainCommand.kt

@@ -7,24 +7,16 @@ import app.revanced.cli.patcher.logging.impl.PatcherLogger
 import app.revanced.cli.signing.Signing
 import app.revanced.cli.signing.SigningOptions
 import app.revanced.patcher.PatcherOptions
-import app.revanced.patcher.data.Context
 import app.revanced.patcher.extensions.PatchExtensions.compatiblePackages
 import app.revanced.patcher.extensions.PatchExtensions.description
 import app.revanced.patcher.extensions.PatchExtensions.patchName
-import app.revanced.patcher.patch.Patch
 import app.revanced.patcher.util.patch.PatchBundle
-import app.revanced.utils.Options
-import app.revanced.utils.Options.setOptions
+import app.revanced.utils.OptionsLoader
 import app.revanced.utils.adb.Adb
 import picocli.CommandLine.*
 import java.io.File
 import java.nio.file.Files
 
-/**
- * Alias for return type of [PatchBundle.loadPatches].
- */
-internal typealias PatchList = List<Class<out Patch<Context>>>
-
 private class CLIVersionProvider : IVersionProvider {
     override fun getVersion() = arrayOf(
         MainCommand::class.java.`package`.implementationVersion ?: "unknown"
@@ -63,8 +55,8 @@ internal object MainCommand : Runnable {
         @Option(names = ["-b", "--bundle"], description = ["One or more bundles of patches"], required = true)
         var patchBundles = arrayOf<String>()
 
-        @Option(names = ["--options"], description = ["Path to patch options JSON file"])
-        var optionsFile: File = File("options.json")
+        @Option(names = ["--options"], description = ["Configuration file for all patch options"])
+        var options: File = File("options.toml")
 
         @ArgGroup(exclusive = false)
         var listingArgs: ListingArgs? = null
@@ -142,10 +134,7 @@ internal object MainCommand : Runnable {
             PatchBundle.Jar(bundle).loadPatches()
         }
 
-        args.patchArgs!!.optionsFile.let {
-            if (it.exists()) allPatches.setOptions(it, logger)
-            else Options.serialize(allPatches, prettyPrint = true).let(it::writeText)
-        }
+        OptionsLoader.init(args.patchArgs!!.options, allPatches)
 
         val patcher = app.revanced.patcher.Patcher(
             PatcherOptions(

src/main/kotlin/app/revanced/cli/patcher/Patcher.kt

@@ -1,7 +1,8 @@
 package app.revanced.cli.patcher
 
-import app.revanced.cli.command.PatchList
 import app.revanced.patcher.PatcherResult
+import app.revanced.patcher.data.Context
+import app.revanced.patcher.patch.Patch
 import app.revanced.utils.patcher.addPatchesFiltered
 import app.revanced.utils.patcher.applyPatchesVerbose
 import app.revanced.utils.patcher.mergeFiles
@@ -9,7 +10,7 @@ import app.revanced.utils.patcher.mergeFiles
 internal object Patcher {
     internal fun start(
         patcher: app.revanced.patcher.Patcher,
-        allPatches: PatchList
+        allPatches: List<Class<out Patch<Context>>>
     ): PatcherResult {
         // merge files like necessary integrations
         patcher.mergeFiles()

src/main/kotlin/app/revanced/utils/Options.kt

@@ -1,107 +0,0 @@
-package app.revanced.utils
-
-import app.revanced.cli.command.PatchList
-import app.revanced.cli.logging.CliLogger
-import app.revanced.patcher.extensions.PatchExtensions.options
-import app.revanced.patcher.extensions.PatchExtensions.patchName
-import app.revanced.patcher.patch.NoSuchOptionException
-import app.revanced.utils.Options.PatchOption.Option
-import com.fasterxml.jackson.module.kotlin.jacksonObjectMapper
-import java.io.File
-
-
-internal object Options {
-    private var mapper = jacksonObjectMapper()
-
-    /**
-     * Serializes the options for the patches in the list.
-     *
-     * @param patches The list of patches to serialize.
-     * @param prettyPrint Whether to pretty print the JSON.
-     * @return The JSON string containing the options.
-     * @see PatchList
-     */
-    fun serialize(patches: PatchList, prettyPrint: Boolean = false): String = patches
-        .filter { it.options?.any() == true }
-        .map { patch ->
-            PatchOption(
-                patch.patchName,
-                patch.options!!.map { option -> Option(option.key, option.value) }
-            )
-        }
-        // See https://github.com/revanced/revanced-patches/pull/2434/commits/60e550550b7641705e81aa72acfc4faaebb225e7.
-        .distinctBy { it.patchName }
-        .let {
-            if (prettyPrint)
-                mapper.writerWithDefaultPrettyPrinter().writeValueAsString(it)
-            else
-                mapper.writeValueAsString(it)
-        }
-
-    /**
-     * Deserializes the options for the patches in the list.
-     *
-     * @param json The JSON string containing the options.
-     * @return The list of [PatchOption]s.
-     * @see PatchOption
-     * @see PatchList
-     */
-    @Suppress("MemberVisibilityCanBePrivate")
-    fun deserialize(json: String): Array<PatchOption> = mapper.readValue(json, Array<PatchOption>::class.java)
-
-    /**
-     * Sets the options for the patches in the list.
-     *
-     * @param json The JSON string containing the options.
-     * @param logger The logger to use for logging.
-     */
-    fun PatchList.setOptions(json: String, logger: CliLogger? = null) {
-        filter { it.options?.any() == true }.let { patches ->
-            if (patches.isEmpty()) return
-
-            val patchOptions = deserialize(json)
-
-            patches.forEach { patch ->
-                patchOptions.find { option -> option.patchName == patch.patchName }?.let {
-                    it.options.forEach { option ->
-                        try {
-                            patch.options?.set(option.key, option.value)
-                                ?: logger?.warn("${patch.patchName} has no options")
-                        } catch (e: NoSuchOptionException) {
-                            logger?.error(e.message ?: "Unknown error")
-                        }
-                    }
-                }
-            }
-        }
-    }
-
-    /**
-     * Sets the options for the patches in the list.
-     *
-     * @param file The file containing the JSON string containing the options.
-     * @param logger The logger to use for logging.
-     * @see setOptions
-     */
-    fun PatchList.setOptions(file: File, logger: CliLogger? = null) = setOptions(file.readText(), logger)
-
-    /**
-     * Data class for a patch and its [Option]s.
-     *
-     * @property patchName The name of the patch.
-     * @property options The [Option]s for the patch.
-     */
-    internal data class PatchOption(
-        val patchName: String,
-        val options: List<Option>
-    ) {
-
-        /**
-         * Data class for patch option.
-         *
-         * @property key The name of the option.
-         * @property value The value of the option.
-         */
-        internal data class Option(val key: String, val value: Any?)
-    }
-}

src/main/kotlin/app/revanced/utils/OptionsLoader.kt

@@ -0,0 +1,77 @@
+package app.revanced.utils
+
+import app.revanced.cli.command.MainCommand.logger
+import app.revanced.patcher.Patcher
+import app.revanced.patcher.data.Context
+import app.revanced.patcher.extensions.PatchExtensions.options
+import app.revanced.patcher.extensions.PatchExtensions.patchName
+import app.revanced.patcher.patch.Patch
+import cc.ekblad.toml.encodeToString
+import cc.ekblad.toml.model.TomlValue
+import cc.ekblad.toml.serialization.from
+import cc.ekblad.toml.tomlMapper
+import java.io.File
+
+private typealias PatchList = List<Class<out Patch<Context>>>
+private typealias OptionsMap = MutableMap<String, MutableMap<String, Any>>
+
+object OptionsLoader {
+    @JvmStatic
+    private val mapper = tomlMapper {}
+
+    @JvmStatic
+    fun init(file: File, patches: PatchList) {
+        if (!file.exists()) file.createNewFile()
+        val map = mapper.decodeWithDefaults(generateDefaults(patches), TomlValue.from(file.toPath()))
+        readAndSet(map, patches)
+        save(map, file)
+    }
+
+    private fun readAndSet(map: OptionsMap, patches: PatchList) {
+        for ((patchName, options) in map) {
+            val patch = patches.find { it.patchName == patchName } ?: continue
+            val patchOptions = patch.options ?: continue
+            for ((key, value) in options) {
+                if (value == "null") { // backwards compatibility, subject to removal
+                    options.remove(key)
+                    continue
+                }
+                try {
+                    patchOptions[key] = value
+                } catch (e: Exception) {
+                    logger.error("Error while setting option $key for patch $patchName: ${e.message}")
+                    e.printStackTrace()
+                }
+            }
+        }
+    }
+
+    private fun save(map: OptionsMap, file: File) {
+        val toml = mapper.encodeToString(map)
+        file.writeText(
+            """
+                # A list of options for each patch.
+                # This file does not contain all options by default.
+                # Run the CLI with the "--list --with-options" flags to see all available options.
+                # You can also run the CLI with the aforementioned flags and a patch name to see all available options for that patch.
+                # To set an option, add a line with the format "option = value" or set the value if the option already exists.
+                # To reset an option to its default value, delete the line.
+                # To reset all options to their default values, delete this file.
+                # 
+                # This file was generated by ReVanced Patcher version ${Patcher.version}.
+            """.trimIndent() + "\n\n$toml"
+        )
+    }
+
+    private fun generateDefaults(patches: PatchList) = buildMap {
+        for (patch in patches) {
+            val options = patch.options ?: continue
+            if (!options.iterator().hasNext()) continue
+            put(patch.patchName, buildMap {
+                for (option in options) {
+                    put(option.key, option.value ?: continue)
+                }
+            } as MutableMap)
+        }
+    } as MutableMap
+}

src/main/kotlin/app/revanced/utils/patcher/Patcher.kt

@@ -3,7 +3,6 @@ package app.revanced.utils.patcher
 import app.revanced.cli.command.MainCommand
 import app.revanced.cli.command.MainCommand.args
 import app.revanced.cli.command.MainCommand.logger
-import app.revanced.cli.command.PatchList
 import app.revanced.patcher.Patcher
 import app.revanced.patcher.data.Context
 import app.revanced.patcher.extensions.PatchExtensions.compatiblePackages
@@ -11,7 +10,7 @@ import app.revanced.patcher.extensions.PatchExtensions.include
 import app.revanced.patcher.extensions.PatchExtensions.patchName
 import app.revanced.patcher.patch.Patch
 
-fun Patcher.addPatchesFiltered(allPatches: PatchList) {
+fun Patcher.addPatchesFiltered(allPatches: List<Class<out Patch<Context>>>) {
     val packageName = this.context.packageMetadata.packageName
     val packageVersion = this.context.packageMetadata.packageVersion
 
@@ -38,7 +37,7 @@ fun Patcher.addPatchesFiltered(allPatches: PatchList) {
                 val compatibleWith = compatiblePackages.joinToString(";") { _package ->
                     "${_package.name}: ${_package.versions.joinToString(", ")}"
                 }
-                logger.warn("$prefix: Incompatible with version $packageVersion. This patch is only compatible with $compatibleWith")
+                logger.warn("$prefix: Incompatible with version $packageVersion. This patch is only compatible with version $compatibleWith")
                 return@patchLoop
             }
         }

src/test/kotlin/app/revanced/patcher/options/PatchOptionOptionsTest.kt

@@ -1,57 +0,0 @@
-package app.revanced.patcher.options
-
-import app.revanced.patcher.data.BytecodeContext
-import app.revanced.patcher.data.Context
-import app.revanced.patcher.patch.*
-import app.revanced.utils.Options
-import app.revanced.utils.Options.setOptions
-import org.junit.jupiter.api.MethodOrderer
-import org.junit.jupiter.api.Order
-import org.junit.jupiter.api.Test
-import org.junit.jupiter.api.TestMethodOrder
-
-class PatchOptionsTestPatch : BytecodePatch() {
-    override fun execute(context: BytecodeContext): PatchResult {
-        return PatchResultSuccess()
-    }
-
-    companion object : OptionsContainer() {
-        var key1 by option(
-            PatchOption.StringOption(
-                "key1", null, "title1", "description1"
-            )
-        )
-
-        var key2 by option(
-            PatchOption.BooleanOption(
-                "key2", true, "title2", "description2"
-            )
-        )
-    }
-}
-
-@TestMethodOrder(MethodOrderer.OrderAnnotation::class)
-internal object PatchOptionOptionsTest {
-    private var patches = listOf(PatchOptionsTestPatch::class.java as Class<out Patch<Context>>)
-
-    @Test
-    @Order(1)
-    fun serializeTest() {
-        assert(SERIALIZED_JSON == Options.serialize(patches))
-    }
-
-    @Test
-    @Order(2)
-    fun loadOptionsTest() {
-        patches.setOptions(CHANGED_JSON)
-
-        assert(PatchOptionsTestPatch.key1 == "test")
-        assert(PatchOptionsTestPatch.key2 == false)
-    }
-
-    private const val SERIALIZED_JSON =
-        "[{\"patchName\":\"PatchOptionsTestPatch\",\"options\":[{\"key\":\"key1\",\"value\":null},{\"key\":\"key2\",\"value\":true}]}]"
-
-    private const val CHANGED_JSON =
-        "[{\"patchName\":\"PatchOptionsTestPatch\",\"options\":[{\"key\":\"key1\",\"value\":\"test\"},{\"key\":\"key2\",\"value\":false}]}]"
-}