chore(release): 3.1.0 [skip ci]

# [3.1.0](https://github.com/ReVanced/revanced-cli/compare/v3.0.1...v3.1.0) (2023-08-31)

### Bug Fixes

* check for package compatibility at first ([9fe5a0b](9fe5a0b6d9))
* do not filter explicitly included patches ([a3d8f00](a3d8f004ec))
* format patches input ([bbb1a63](bbb1a63abd))

### Features

* Simplify command description ([3b3f7c7](3b3f7c7a7a))

.github/workflows/release.yml

@@ -33,9 +33,10 @@ jobs:
             build
             node_modules
           key: ${{ runner.os }}-gradle-npm-${{ hashFiles('**/*.gradle*', '**/gradle-wrapper.properties', 'package-lock.json') }}
-      - name: Build with Gradle
+      - name: Build
         env:
           GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+        # Cleaning is necessary to avoid uploading two identical artifacts with different versions
         run: ./gradlew clean --no-daemon
       - name: Setup semantic-release
         run: npm install

CHANGELOG.md

@@ -1,3 +1,143 @@
+# [3.1.0](https://github.com/ReVanced/revanced-cli/compare/v3.0.1...v3.1.0) (2023-08-31)
+
+
+### Bug Fixes
+
+* check for package compatibility at first ([9fe5a0b](https://github.com/ReVanced/revanced-cli/commit/9fe5a0b6d93304f630436ed0e954723d9a27b0f6))
+* do not filter explicitly included patches ([a3d8f00](https://github.com/ReVanced/revanced-cli/commit/a3d8f004ec405f696d99d96c74ca41b573ecf425))
+* format patches input ([bbb1a63](https://github.com/ReVanced/revanced-cli/commit/bbb1a63abd80dcbecdcf362158c0429cf3e6318f))
+
+
+### Features
+
+* Simplify command description ([3b3f7c7](https://github.com/ReVanced/revanced-cli/commit/3b3f7c7a7a7b2795e3d1fad776f6b457f2e68c7b))
+
+# [3.1.0-dev.1](https://github.com/ReVanced/revanced-cli/compare/v3.0.2-dev.2...v3.1.0-dev.1) (2023-08-28)
+
+
+### Bug Fixes
+
+* format patches input ([bbb1a63](https://github.com/ReVanced/revanced-cli/commit/bbb1a63abd80dcbecdcf362158c0429cf3e6318f))
+
+
+### Features
+
+* Simplify command description ([3b3f7c7](https://github.com/ReVanced/revanced-cli/commit/3b3f7c7a7a7b2795e3d1fad776f6b457f2e68c7b))
+
+## [3.0.2-dev.2](https://github.com/ReVanced/revanced-cli/compare/v3.0.2-dev.1...v3.0.2-dev.2) (2023-08-28)
+
+
+### Bug Fixes
+
+* check for package compatibility at first ([9fe5a0b](https://github.com/ReVanced/revanced-cli/commit/9fe5a0b6d93304f630436ed0e954723d9a27b0f6))
+
+## [3.0.2-dev.1](https://github.com/ReVanced/revanced-cli/compare/v3.0.1...v3.0.2-dev.1) (2023-08-28)
+
+
+### Bug Fixes
+
+* do not filter explicitly included patches ([a3d8f00](https://github.com/ReVanced/revanced-cli/commit/a3d8f004ec405f696d99d96c74ca41b573ecf425))
+
+## [3.0.1](https://github.com/ReVanced/revanced-cli/compare/v3.0.0...v3.0.1) (2023-08-28)
+
+## [3.0.1-dev.1](https://github.com/ReVanced/revanced-cli/compare/v3.0.0...v3.0.1-dev.1) (2023-08-28)
+
+# [3.0.0](https://github.com/ReVanced/revanced-cli/compare/v2.22.0...v3.0.0) (2023-08-26)
+
+
+### Bug Fixes
+
+* also delete temporary files when uninstalling ([52c3be2](https://github.com/ReVanced/revanced-cli/commit/52c3be23f2915dccaee7f9941413c8f81e14acc8))
+* delete temporary files after root installation ([a3d8705](https://github.com/ReVanced/revanced-cli/commit/a3d8705e89732a0dd4f51de28c405b6af13c8633))
+* do not delete output file ([0f3e090](https://github.com/ReVanced/revanced-cli/commit/0f3e090418771e951dfd15e5c193421f72cbe459))
+* do not use absolute path from custom AAPT2 binary option ([a9c2a5f](https://github.com/ReVanced/revanced-cli/commit/a9c2a5f096627dbbf8ab1b8da26fb14529ce6bc3))
+* filtration of patches malfunctioning ([2d5a7fd](https://github.com/ReVanced/revanced-cli/commit/2d5a7fdf1eb2e13f5013a790b03f09851b167fe0))
+* fix running commands not running ([2c7fcaf](https://github.com/ReVanced/revanced-cli/commit/2c7fcaf4add65a12052afc5bef779dbc73debd69))
+* only check once for patch options ([11c3a6c](https://github.com/ReVanced/revanced-cli/commit/11c3a6cfd4fe59ba5d703358634a1853e1cc22a5))
+* print original instead of kebab cased names ([5eaad33](https://github.com/ReVanced/revanced-cli/commit/5eaad33dc1fbd24c36e1498f04e21d068e85f53e))
+* print stack trace when a patch failed ([924c1f8](https://github.com/ReVanced/revanced-cli/commit/924c1f80ec0d17a3bdc07a0fb2015e44c49162e4))
+* specify correct class containing entry-point ([1fcc591](https://github.com/ReVanced/revanced-cli/commit/1fcc591222ab67112f2b78174a8b94106846838c))
+* use correct option name ([f8972ea](https://github.com/ReVanced/revanced-cli/commit/f8972eac3e5ee0a4a186c12cbe711925656d657b))
+
+
+* refactor!: restructure code ([07da528](https://github.com/ReVanced/revanced-cli/commit/07da528ce2223582f84bf64d2fec69714c647ddc))
+
+
+### Features
+
+* add install command ([0350b7f](https://github.com/ReVanced/revanced-cli/commit/0350b7f1a276d9dc795b22442ba4f202855ea090))
+* add options command ([9edbbf3](https://github.com/ReVanced/revanced-cli/commit/9edbbf31635603f89fc7bc5dcc6c023d4cdbb5a6))
+* Check for missing integrations ([c93186f](https://github.com/ReVanced/revanced-cli/commit/c93186fb9700907e65f33442e88073783cc163de))
+* Improve command line argument descriptions ([f9cf7d2](https://github.com/ReVanced/revanced-cli/commit/f9cf7d21b7f1c2f11234d604a1047b9d2b165f83))
+* properly make use of logging facade ([41898d7](https://github.com/ReVanced/revanced-cli/commit/41898d7547690e3130372414515c5645e5dc2634))
+* show full package name when listing patches ([#240](https://github.com/ReVanced/revanced-cli/issues/240)) ([7174364](https://github.com/ReVanced/revanced-cli/commit/7174364ef8ef5d6ce8351a8340f9c1a5b58eac3c))
+* use better logging text ([b0e748d](https://github.com/ReVanced/revanced-cli/commit/b0e748daff527ee7f417b3069882e074896fc131))
+* use friendly descriptions ([3dd875d](https://github.com/ReVanced/revanced-cli/commit/3dd875d14cca488ade6d21bbd4cce0d481692134))
+* use separate command to list patches ([b74213f](https://github.com/ReVanced/revanced-cli/commit/b74213f66e0d04d3a0ae6197d069631388e06580))
+* use separate command to patch ([32da961](https://github.com/ReVanced/revanced-cli/commit/32da961d57537e99b39fd92b625a1c73f8314bc6))
+* use separate command to uninstall ([c0cc909](https://github.com/ReVanced/revanced-cli/commit/c0cc90962646cfffd5e2730ae556423271a7990b))
+* use simpler log ([ba758f0](https://github.com/ReVanced/revanced-cli/commit/ba758f00f4ce18791439b7e72fe1ad2e7f11f8af))
+
+
+### BREAKING CHANGES
+
+* This introduces major changes to how ReVanced CLI is used from the command line.
+
+# [3.0.0-dev.10](https://github.com/ReVanced/revanced-cli/compare/v3.0.0-dev.9...v3.0.0-dev.10) (2023-08-25)
+
+
+### Bug Fixes
+
+* filtration of patches malfunctioning ([2d5a7fd](https://github.com/ReVanced/revanced-cli/commit/2d5a7fdf1eb2e13f5013a790b03f09851b167fe0))
+
+# [3.0.0-dev.9](https://github.com/ReVanced/revanced-cli/compare/v3.0.0-dev.8...v3.0.0-dev.9) (2023-08-25)
+
+
+### Features
+
+* Check for missing integrations ([c93186f](https://github.com/ReVanced/revanced-cli/commit/c93186fb9700907e65f33442e88073783cc163de))
+
+# [3.0.0-dev.8](https://github.com/ReVanced/revanced-cli/compare/v3.0.0-dev.7...v3.0.0-dev.8) (2023-08-24)
+
+
+### Bug Fixes
+
+* do not delete output file ([0f3e090](https://github.com/ReVanced/revanced-cli/commit/0f3e090418771e951dfd15e5c193421f72cbe459))
+
+# [3.0.0-dev.7](https://github.com/ReVanced/revanced-cli/compare/v3.0.0-dev.6...v3.0.0-dev.7) (2023-08-24)
+
+
+### Bug Fixes
+
+* print stack trace when a patch failed ([924c1f8](https://github.com/ReVanced/revanced-cli/commit/924c1f80ec0d17a3bdc07a0fb2015e44c49162e4))
+
+# [3.0.0-dev.6](https://github.com/ReVanced/revanced-cli/compare/v3.0.0-dev.5...v3.0.0-dev.6) (2023-08-24)
+
+# [3.0.0-dev.5](https://github.com/ReVanced/revanced-cli/compare/v3.0.0-dev.4...v3.0.0-dev.5) (2023-08-24)
+
+
+### Bug Fixes
+
+* also delete temporary files when uninstalling ([52c3be2](https://github.com/ReVanced/revanced-cli/commit/52c3be23f2915dccaee7f9941413c8f81e14acc8))
+* delete temporary files after root installation ([a3d8705](https://github.com/ReVanced/revanced-cli/commit/a3d8705e89732a0dd4f51de28c405b6af13c8633))
+* fix running commands not running ([2c7fcaf](https://github.com/ReVanced/revanced-cli/commit/2c7fcaf4add65a12052afc5bef779dbc73debd69))
+* only check once for patch options ([11c3a6c](https://github.com/ReVanced/revanced-cli/commit/11c3a6cfd4fe59ba5d703358634a1853e1cc22a5))
+
+
+### Features
+
+* add install command ([0350b7f](https://github.com/ReVanced/revanced-cli/commit/0350b7f1a276d9dc795b22442ba4f202855ea090))
+* use friendly descriptions ([3dd875d](https://github.com/ReVanced/revanced-cli/commit/3dd875d14cca488ade6d21bbd4cce0d481692134))
+
+# [3.0.0-dev.4](https://github.com/ReVanced/revanced-cli/compare/v3.0.0-dev.3...v3.0.0-dev.4) (2023-08-24)
+
+
+### Features
+
+* properly make use of logging facade ([41898d7](https://github.com/ReVanced/revanced-cli/commit/41898d7547690e3130372414515c5645e5dc2634))
+
+# [3.0.0-dev.3](https://github.com/ReVanced/revanced-cli/compare/v3.0.0-dev.2...v3.0.0-dev.3) (2023-08-23)
+
 # [3.0.0-dev.2](https://github.com/ReVanced/revanced-cli/compare/v3.0.0-dev.1...v3.0.0-dev.2) (2023-08-23)
 
 

build.gradle.kts

@@ -31,10 +31,6 @@ tasks {
         expand("projectVersion" to project.version)
     }
 
-    build {
-        dependsOn(shadowJar)
-    }
-
     shadowJar {
         manifest {
             attributes("Main-Class" to "app.revanced.cli.command.MainCommandKt")
@@ -46,11 +42,16 @@ tasks {
         }
     }
 
+    build {
+        dependsOn(shadowJar)
+    }
+
     // Dummy task to fix the Gradle semantic-release plugin.
     // Remove this if you forked it to support building only.
     // Tracking issue: https://github.com/KengoTODA/gradle-semantic-release-plugin/issues/435
     register<DefaultTask>("publish") {
         group = "publish"
         description = "Dummy task"
+        dependsOn(build)
     }
 }

docs/1_usage.md

@@ -86,12 +86,26 @@ Learn how to ReVanced CLI.
 
   > **Note**: Some patches may require integrations
   such as [ReVanced Integrations](https://github.com/revanced/revanced-integrations). 
-  Supply them with the option `-m`. If any patches accepted by ReVanced Patcher require ReVanced Integrations, 
+  Supply them with the option `--merge`. If any patches accepted by ReVanced Patcher require ReVanced Integrations, 
   they will be merged into the APK file automatically.
 
 - ### 🗑️ Uninstall a patched APK file
   ```bash
-  java -jar revanced-cli.jar uninstall \
+  java -jar revanced-cli.jar utility uninstall \
    --package-name <package-name> \
    <device-serial>
   ```
+
+  > **Note**: You can unmount an APK file
+  with the option `--unmount`.
+
+- ### ️ ⚙️ Manually install an APK file
+
+  ```bash
+  java -jar revanced-cli.jar utility install \
+   -a input.apk \
+   <device-serial>
+  ```
+
+  > **Note**: You can mount an APK file 
+  by supplying the package name of the app to mount the supplied APK file to over the option `--mount`.

gradle.properties

@@ -1,4 +1,4 @@
 org.gradle.parallel = true
 org.gradle.caching = true
 kotlin.code.style = official
-version = 3.0.0-dev.2
+version = 3.1.0

gradle/libs.versions.toml

@@ -1,6 +1,6 @@
 [versions]
 shadow = "8.1.1"
-apksig = "8.1.0"
+apksig = "8.1.1"
 bcpkix-jdk15on = "1.70"
 jackson-module-kotlin = "2.14.3"
 jadb = "2531a28109"
@@ -8,7 +8,7 @@ kotlin-reflect = "1.9.0"
 kotlin-test = "1.8.20-RC"
 kotlinx-coroutines-core = "1.7.1"
 picocli = "4.7.3"
-revanced-patcher = "14.0.0"
+revanced-patcher = "14.2.1"
 
 [libraries]
 apksig = { module = "com.android.tools.build:apksig", version.ref = "apksig" }

src/main/kotlin/app/revanced/cli/command/ListPatchesCommand.kt

@@ -11,43 +11,41 @@ import app.revanced.patcher.patch.PatchOption
 import picocli.CommandLine.*
 import picocli.CommandLine.Help.Visibility.ALWAYS
 import java.io.File
+import java.util.logging.Logger
 
 
 @Command(name = "list-patches", description = ["List patches from supplied patch bundles"])
 internal object ListPatchesCommand : Runnable {
+    private val logger = Logger.getLogger(ListPatchesCommand::class.java.name)
+
     @Parameters(
-        description = ["Paths to patch bundles"],
-        arity = "1..*"
+        description = ["Paths to patch bundles"], arity = "1..*"
     )
-    lateinit var patchBundles: Array<File>
+    private lateinit var patchBundles: Array<File>
 
     @Option(
-        names = ["-d", "--with-descriptions"],
-        description = ["List their descriptions"],
-        showDefaultValue = ALWAYS
+        names = ["-d", "--with-descriptions"], description = ["List their descriptions"], showDefaultValue = ALWAYS
     )
-    var withDescriptions: Boolean = true
+    private var withDescriptions: Boolean = true
 
     @Option(
         names = ["-p", "--with-packages"],
         description = ["List the packages the patches are compatible with"],
         showDefaultValue = ALWAYS
     )
-    var withPackages: Boolean = false
+    private var withPackages: Boolean = false
 
     @Option(
         names = ["-v", "--with-versions"],
-        description = ["List the versions of the packages the patches are compatible with"],
+        description = ["List the versions of the apps the patches are compatible with"],
         showDefaultValue = ALWAYS
     )
-    var withVersions: Boolean = false
+    private var withVersions: Boolean = false
 
     @Option(
-        names = ["-o", "--with-options"],
-        description = ["List the options of the patches"],
-        showDefaultValue = ALWAYS
+        names = ["-o", "--with-options"], description = ["List the options of the patches"], showDefaultValue = ALWAYS
     )
-    var withOptions: Boolean = false
+    private var withOptions: Boolean = false
 
     override fun run() {
         fun Package.buildString() = buildString {
@@ -55,8 +53,7 @@ internal object ListPatchesCommand : Runnable {
                 appendLine("Package name: $name")
                 appendLine("Compatible versions:")
                 append(versions.joinToString("\n") { version -> version }.prependIndent("\t"))
-            } else
-                append("Package name: $name")
+            } else append("Package name: $name")
         }
 
         fun PatchOption<*>.buildString() = buildString {

src/main/kotlin/app/revanced/cli/command/MainCommand.kt

@@ -1,21 +1,48 @@
 package app.revanced.cli.command
 
-import app.revanced.cli.logging.impl.DefaultCliLogger
+import app.revanced.cli.command.utility.UtilityCommand
 import app.revanced.patcher.patch.PatchClass
 import picocli.CommandLine
 import picocli.CommandLine.Command
 import picocli.CommandLine.IVersionProvider
 import java.util.*
+import java.util.logging.*
+
 
 fun main(args: Array<String>) {
+    System.setProperty("java.util.logging.SimpleFormatter.format", "%4\$s: %5\$s %n")
+    Logger.getLogger("").apply {
+        handlers.forEach {
+            it.close()
+            removeHandler(it)
+        }
+
+        object : Handler() {
+            override fun publish(record: LogRecord) = formatter.format(record).toByteArray().let {
+                if (record.level.intValue() > Level.INFO.intValue())
+                    System.err.write(it)
+                else
+                    System.out.write(it)
+            }
+
+            override fun flush() {
+                System.out.flush()
+                System.err.flush()
+            }
+
+            override fun close() = flush()
+        }.also {
+            it.level = Level.ALL
+            it.formatter = SimpleFormatter()
+        }.let(::addHandler)
+    }
+
     CommandLine(MainCommand).execute(*args)
 }
 
 internal typealias PatchList = List<PatchClass>
 
-internal val logger = DefaultCliLogger()
-
-object CLIVersionProvider : IVersionProvider {
+private object CLIVersionProvider : IVersionProvider {
     override fun getVersion(): Array<String> {
         Properties().apply {
             load(MainCommand::class.java.getResourceAsStream("/app/revanced/cli/version.properties"))
@@ -33,8 +60,8 @@ object CLIVersionProvider : IVersionProvider {
     subcommands = [
         ListPatchesCommand::class,
         PatchCommand::class,
-        UninstallCommand::class,
         OptionsCommand::class,
+        UtilityCommand::class,
     ]
 )
-internal object MainCommand
+private object MainCommand

src/main/kotlin/app/revanced/cli/command/OptionsCommand.kt

@@ -6,45 +6,41 @@ import app.revanced.utils.Options.setOptions
 import picocli.CommandLine
 import picocli.CommandLine.Help.Visibility.ALWAYS
 import java.io.File
+import java.util.logging.Logger
 
 @CommandLine.Command(
     name = "options",
     description = ["Generate options file from patches"],
 )
 internal object OptionsCommand : Runnable {
+    private val logger = Logger.getLogger(OptionsCommand::class.java.name)
+
     @CommandLine.Parameters(
-        description = ["Paths to patch bundles"],
-        arity = "1..*"
+        description = ["Paths to patch bundles"], arity = "1..*"
     )
-    lateinit var patchBundles: Array<File>
+    private lateinit var patchBundles: Array<File>
 
     @CommandLine.Option(
-        names = ["-p", "--path"],
-        description = ["Path to patch options JSON file"],
-        showDefaultValue = ALWAYS
+        names = ["-p", "--path"], description = ["Path to patch options JSON file"], showDefaultValue = ALWAYS
     )
-    var path: File = File("options.json")
+    private var path: File = File("options.json")
 
     @CommandLine.Option(
-        names = ["-o", "--overwrite"],
-        description = ["Overwrite existing options file"],
-        showDefaultValue = ALWAYS
+        names = ["-o", "--overwrite"], description = ["Overwrite existing options file"], showDefaultValue = ALWAYS
     )
-    var overwrite: Boolean = false
+    private var overwrite: Boolean = false
 
     @CommandLine.Option(
         names = ["-u", "--update"],
         description = ["Update existing options by adding missing and removing non-existent options"],
         showDefaultValue = ALWAYS
     )
-    var update: Boolean = false
+    private var update: Boolean = false
 
-    override fun run() = if (!path.exists() || overwrite)
-        with(PatchBundleLoader.Jar(*patchBundles)) {
-            if (update) setOptions(path, logger)
+    override fun run() = if (!path.exists() || overwrite) with(PatchBundleLoader.Jar(*patchBundles)) {
+        if (update) setOptions(path)
 
-            Options.serialize(this, prettyPrint = true)
-                .let(path::writeText)
-        }
-    else logger.error("Options file already exists, use --override to override it")
+        Options.serialize(this, prettyPrint = true).let(path::writeText)
+    }
+    else logger.severe("Options file already exists, use --override to override it")
 }

src/main/kotlin/app/revanced/cli/command/PatchCommand.kt

@@ -1,6 +1,5 @@
 package app.revanced.cli.command
 
-import app.revanced.cli.patcher.logging.impl.PatcherLogger
 import app.revanced.patcher.PatchBundleLoader
 import app.revanced.patcher.Patcher
 import app.revanced.patcher.PatcherOptions
@@ -20,85 +19,75 @@ import kotlinx.coroutines.runBlocking
 import picocli.CommandLine
 import picocli.CommandLine.Help.Visibility.ALWAYS
 import java.io.File
+import java.io.PrintWriter
+import java.io.StringWriter
+import java.util.logging.Logger
 
 
 @CommandLine.Command(
-    name = "patch",
-    description = ["Patch the supplied APK file with the supplied patches and integrations"]
+    name = "patch", description = ["Patch an APK file"]
 )
-internal object PatchCommand: Runnable {
+internal object PatchCommand : Runnable {
+    private val logger = Logger.getLogger(PatchCommand::class.java.name)
+
     @CommandLine.Parameters(
-        description = ["APK file to be patched"],
-        arity = "1..1"
+        description = ["APK file to be patched"], arity = "1..1"
     )
-    lateinit var apk: File
+    private lateinit var apk: File
 
     @CommandLine.Option(
-        names = ["-b", "--patch-bundle"],
-        description = ["One or more bundles of patches"],
-        required = true
+        names = ["-b", "--patch-bundle"], description = ["One or more bundles of patches"], required = true
     )
-    var patchBundles = emptyList<File>()
+    private var patchBundles = emptyList<File>()
 
     @CommandLine.Option(
-        names = ["-m", "--merge"],
-        description = ["One or more DEX files or containers to merge into the APK"]
+        names = ["-m", "--merge"], description = ["One or more DEX files or containers to merge into the APK"]
     )
-    var integrations = listOf<File>()
+    private var integrations = listOf<File>()
 
     @CommandLine.Option(
-        names = ["-i", "--include"],
-        description = ["List of patches to include"]
+        names = ["-i", "--include"], description = ["List of patches to include"]
     )
-    var includedPatches = arrayOf<String>()
+    private var includedPatches = arrayOf<String>()
 
     @CommandLine.Option(
-        names = ["-e", "--exclude"],
-        description = ["List of patches to exclude"]
+        names = ["-e", "--exclude"], description = ["List of patches to exclude"]
     )
-    var excludedPatches = arrayOf<String>()
+    private var excludedPatches = arrayOf<String>()
 
     @CommandLine.Option(
-        names = ["--options"],
-        description = ["Path to patch options JSON file"],
-        showDefaultValue = ALWAYS
+        names = ["--options"], description = ["Path to patch options JSON file"], showDefaultValue = ALWAYS
     )
-    var optionsFile: File = File("options.json")
+    private var optionsFile: File = File("options.json")
 
     @CommandLine.Option(
         names = ["--exclusive"],
         description = ["Only include patches that are explicitly specified to be included"],
         showDefaultValue = ALWAYS
     )
-    var exclusive = false
+    private var exclusive = false
 
     @CommandLine.Option(
-        names = ["--experimental"],
-        description = ["Ignore patches incompatibility to versions"],
+        names = ["-f","--force"],
+        description = ["Force inclusion of patches that are incompatible with the supplied APK file's version"],
         showDefaultValue = ALWAYS
     )
-    var experimental: Boolean = false
+    private var force: Boolean = false
 
     @CommandLine.Option(
-        names = ["-o", "--out"],
-        description = ["Path to save the patched APK file to"],
-        required = true
+        names = ["-o", "--out"], description = ["Path to save the patched APK file to"], required = true
     )
-    lateinit var outputFilePath: File
+    private lateinit var outputFilePath: File
 
     @CommandLine.Option(
-        names = ["-d", "--device-serial"],
-        description = ["ADB device serial to install to"],
-        showDefaultValue = ALWAYS
+        names = ["-d", "--device-serial"], description = ["ADB device serial to install to"], showDefaultValue = ALWAYS
     )
-    var deviceSerial: String? = null
+    private var deviceSerial: String? = null
 
     @CommandLine.Option(
-        names = ["--mount"],
-        description = ["Install by mounting the patched package"],
-        showDefaultValue = ALWAYS
+        names = ["--mount"], description = ["Install by mounting the patched APK file"], showDefaultValue = ALWAYS
     )
-    var mount: Boolean = false
+    private var mount: Boolean = false
 
     @CommandLine.Option(
         names = ["--common-name"],
@@ -106,53 +95,57 @@ internal object PatchCommand: Runnable {
         showDefaultValue = ALWAYS
 
     )
-    var commonName = "ReVanced"
+    private var commonName = "ReVanced"
 
     @CommandLine.Option(
-        names = ["--keystore"],
-        description = ["Path to the keystore to sign the patched APK file with"]
+        names = ["--keystore"], description = ["Path to the keystore to sign the patched APK file with"]
     )
-    var keystorePath: String? = null
+    private var keystorePath: String? = null
 
     @CommandLine.Option(
-        names = ["--password"],
-        description = ["The password of the keystore to sign the patched APK file with"]
+        names = ["--password"], description = ["The password of the keystore to sign the patched APK file with"]
     )
-    var password = "ReVanced"
+    private var password = "ReVanced"
 
     @CommandLine.Option(
         names = ["-r", "--resource-cache"],
         description = ["Path to temporary resource cache directory"],
         showDefaultValue = ALWAYS
     )
-    var resourceCachePath = File("revanced-resource-cache")
+    private var resourceCachePath = File("revanced-resource-cache")
 
     @CommandLine.Option(
-        names = ["--custom-aapt2-binary"],
-        description = ["Path to a custom AAPT binary to compile resources with"]
+        names = ["--custom-aapt2-binary"], description = ["Path to a custom AAPT binary to compile resources with"]
     )
-    var aaptBinaryPath = File("")
+    private var aaptBinaryPath = File("")
 
     @CommandLine.Option(
         names = ["-p", "--purge"],
         description = ["Purge the temporary resource cache directory after patching"],
         showDefaultValue = ALWAYS
     )
-    var purge: Boolean = false
+    private var purge: Boolean = false
 
     override fun run() {
         // region Prepare
 
         if (!apk.exists()) {
-            logger.error("Input file ${apk.name} does not exist")
+            logger.severe("APK file ${apk.name} does not exist")
+            return
+        }
+
+        integrations.filter { !it.exists() }.let {
+            if (it.isEmpty()) return@let
+
+            it.forEach { integration ->
+                logger.severe("Integration file ${integration.name} does not exist")
+            }
             return
         }
 
         val adbManager = deviceSerial?.let { serial ->
-            if (mount) AdbManager.RootAdbManager(serial, logger) else AdbManager.UserAdbManager(
-                serial,
-                logger
-            )
+            if (mount) AdbManager.RootAdbManager(serial)
+            else AdbManager.UserAdbManager(serial)
         }
 
         // endregion
@@ -167,7 +160,7 @@ internal object PatchCommand: Runnable {
         logger.info("Setting patch options")
 
         optionsFile.let {
-            if (it.exists()) patches.setOptions(it, logger)
+            if (it.exists()) patches.setOptions(it)
             else Options.serialize(patches, prettyPrint = true).let(it::writeText)
         }
 
@@ -181,7 +174,6 @@ internal object PatchCommand: Runnable {
                 resourceCachePath,
                 aaptBinaryPath.path,
                 resourceCachePath.absolutePath,
-                PatcherLogger
             )
         )
 
@@ -193,7 +185,10 @@ internal object PatchCommand: Runnable {
             runBlocking {
                 apply(false).collect { patchResult ->
                     patchResult.exception?.let {
-                        logger.error("${patchResult.patchName} failed:\n${patchResult.exception}")
+                        StringWriter().use { writer ->
+                            it.printStackTrace(PrintWriter(writer))
+                            logger.severe("${patchResult.patchName} failed: $writer")
+                        }
                     } ?: logger.info("${patchResult.patchName} succeeded")
                 }
             }
@@ -207,8 +202,7 @@ internal object PatchCommand: Runnable {
 
         val alignAndSignedFile = sign(
             apk.newAlignedFile(
-                result,
-                resourceCachePath.resolve("${outputFilePath.nameWithoutExtension}_aligned.apk")
+                result, resourceCachePath.resolve("${outputFilePath.nameWithoutExtension}_aligned.apk")
             )
         )
 
@@ -219,7 +213,6 @@ internal object PatchCommand: Runnable {
 
         if (purge) {
             logger.info("Purging temporary files")
-            outputFilePath.delete()
             purge(resourceCachePath)
         }
 
@@ -232,104 +225,59 @@ internal object PatchCommand: Runnable {
      * - [includedPatches] (explicitly included)
      * - [excludedPatches] (explicitly excluded)
      * - [exclusive] (only include patches that are explicitly included)
-     * - [experimental] (ignore patches incompatibility to versions)
-     * - package name and version of the input APK file (if [experimental] is false)
+     * - [force] (ignore patches incompatibility to versions)
+     * - Package name and version of the input APK file (if [force] is false)
      *
      * @param patches The patches to filter.
      * @return The filtered patches.
      */
     private fun Patcher.filterPatchSelection(patches: PatchList) = buildList {
+        // TODO: Remove this eventually because
+        //  patches named "patch-name" and "patch name" will conflict.
+        fun String.format() = lowercase().replace(" ", "-")
+
+        val formattedExcludedPatches = excludedPatches.map { it.format() }
+        val formattedIncludedPatches = includedPatches.map { it.format() }
+
         val packageName = context.packageMetadata.packageName
         val packageVersion = context.packageMetadata.packageVersion
 
         patches.forEach patch@{ patch ->
-            val formattedPatchName = patch.patchName.lowercase().replace(" ", "-")
+            val formattedPatchName = patch.patchName.format()
 
-            /**
-             * Check if the patch is explicitly excluded.
-             *
-             * Cases:
-             *  1. -e patch.name
-             *  2. -i patch.name -e patch.name
-             */
-
-            /**
-             * Check if the patch is explicitly excluded.
-             *
-             * Cases:
-             *  1. -e patch.name
-             *  2. -i patch.name -e patch.name
-             */
-
-            val excluded = excludedPatches.contains(formattedPatchName)
-            if (excluded) return@patch logger.info("Excluding ${patch.patchName}")
-
-            /**
-             * Check if the patch is constrained to packages.
-             */
-
-            /**
-             * Check if the patch is constrained to packages.
-             */
+            val explicitlyExcluded = formattedExcludedPatches.contains(formattedPatchName)
+            if (explicitlyExcluded) return@patch logger.info("Excluding ${patch.patchName}")
 
+            // Make sure the patch is compatible with the supplied APK files package name and version.
             patch.compatiblePackages?.let { packages ->
                 packages.singleOrNull { it.name == packageName }?.let { `package` ->
-                    /**
-                     * Check if the package version matches.
-                     * If experimental is true, version matching will be skipped.
-                     */
-
-                    /**
-                     * Check if the package version matches.
-                     * If experimental is true, version matching will be skipped.
-                     */
-
-                    val matchesVersion = experimental || `package`.versions.let {
+                    val matchesVersion = force || `package`.versions.let {
                         it.isEmpty() || it.any { version -> version == packageVersion }
                     }
 
-                    if (!matchesVersion) return@patch logger.warn(
-                        "${patch.patchName} is incompatible with version $packageVersion. " +
-                                "This patch is only compatible with version " +
-                                packages.joinToString(";") { pkg ->
-                                    "${pkg.name}: ${pkg.versions.joinToString(", ")}"
-                                }
+                    if (!matchesVersion) return@patch logger.warning(
+                        "${patch.patchName} is incompatible with version $packageVersion. "
+                                + "This patch is only compatible with version "
+                                + packages.joinToString(";") { pkg ->
+                            "${pkg.name}: ${pkg.versions.joinToString(", ")}"
+                        }
                     )
-
-                } ?: return@patch logger.trace(
-                    "${patch.patchName} is incompatible with $packageName. " +
-                            "This patch is only compatible with " +
-                            packages.joinToString(", ") { `package` -> `package`.name }
-                )
+                } ?: return@patch logger.fine("${patch.patchName} is incompatible with $packageName. "
+                        + "This patch is only compatible with "
+                        + packages.joinToString(", ") { `package` -> `package`.name })
 
                 return@let
-            } ?: logger.trace("$formattedPatchName: No constraint on packages.")
+            } ?: logger.fine("$formattedPatchName: No constraint on packages.")
 
-            /**
-             * Check if the patch is explicitly included.
-             *
-             * Cases:
-             *  1. --exclusive
-             *  2. --exclusive -i patch.name
-             */
+            // If the patch is implicitly included, it will be only included if [exclusive] is false.
+            val implicitlyIncluded = !exclusive && patch.include
+            // If the patch is explicitly included, it will be included even if [exclusive] is false.
+            val explicitlyIncluded = formattedIncludedPatches.contains(formattedPatchName)
 
-            /**
-             * Check if the patch is explicitly included.
-             *
-             * Cases:
-             *  1. --exclusive
-             *  2. --exclusive -i patch.name
-             */
-
-            val explicitlyIncluded = includedPatches.contains(formattedPatchName)
-
-            val implicitlyIncluded = !exclusive && patch.include // Case 3.
-            val exclusivelyIncluded = exclusive && explicitlyIncluded // Case 2.
-
-            val included = implicitlyIncluded || exclusivelyIncluded
+            val included = implicitlyIncluded || explicitlyIncluded
             if (!included) return@patch logger.info("${patch.patchName} excluded by default") // Case 1.
 
-            logger.trace("Adding $formattedPatchName")
+            logger.fine("Adding $formattedPatchName")
 
             add(patch)
         }
@@ -342,8 +290,7 @@ internal object PatchCommand: Runnable {
      * @param outputFile The file to save the aligned APK to.
      */
     private fun File.newAlignedFile(
-        result: PatcherResult,
-        outputFile: File
+        result: PatcherResult, outputFile: File
     ): File {
         logger.info("Aligning $name")
 
@@ -352,23 +299,20 @@ internal object PatchCommand: Runnable {
         ZipFile(outputFile).use { file ->
             result.dexFiles.forEach {
                 file.addEntryCompressData(
-                    ZipEntry.createWithName(it.name),
-                    it.stream.readBytes()
+                    ZipEntry.createWithName(it.name), it.stream.readBytes()
                 )
             }
 
             result.resourceFile?.let {
                 file.copyEntriesFromFileAligned(
-                    ZipFile(it),
-                    ZipAligner::getEntryAlignment
+                    ZipFile(it), ZipAligner::getEntryAlignment
                 )
             }
 
             // TODO: Do not compress result.doNotCompress
 
             file.copyEntriesFromFileAligned(
-                ZipFile(this),
-                ZipAligner::getEntryAlignment
+                ZipFile(this), ZipAligner::getEntryAlignment
             )
         }
 
@@ -381,32 +325,25 @@ internal object PatchCommand: Runnable {
      * @param inputFile The APK file to sign.
      * @return The signed APK file. If [mount] is true, the input file will be returned.
      */
-    private fun sign(inputFile: File) = if (mount)
-        inputFile
+    private fun sign(inputFile: File) = if (mount) inputFile
     else {
         logger.info("Signing ${inputFile.name}")
 
-        val keyStoreFilePath = keystorePath ?: outputFilePath
-            .absoluteFile.parentFile.resolve("${outputFilePath.nameWithoutExtension}.keystore").canonicalPath
+        val keyStoreFilePath = keystorePath
+            ?: outputFilePath.absoluteFile.parentFile.resolve("${outputFilePath.nameWithoutExtension}.keystore").canonicalPath
 
         val options = SigningOptions(
-            commonName,
-            password,
-            keyStoreFilePath
+            commonName, password, keyStoreFilePath
         )
 
-        ApkSigner(options)
-            .signApk(
-                inputFile,
-                resourceCachePath.resolve("${outputFilePath.nameWithoutExtension}_signed.apk")
+        ApkSigner(options).signApk(
+                inputFile, resourceCachePath.resolve("${outputFilePath.nameWithoutExtension}_signed.apk")
             )
     }
 
     private fun purge(resourceCachePath: File) {
-        val result = if (resourceCachePath.deleteRecursively())
-            "Purged resource cache directory"
-        else
-            "Failed to purge resource cache directory"
+        val result = if (resourceCachePath.deleteRecursively()) "Purged resource cache directory"
+        else "Failed to purge resource cache directory"
         logger.info(result)
     }
 }

src/main/kotlin/app/revanced/cli/command/UninstallCommand.kt

@@ -1,44 +0,0 @@
-package app.revanced.cli.command
-
-import app.revanced.utils.adb.AdbManager
-import picocli.CommandLine.*
-import picocli.CommandLine.Help.Visibility.ALWAYS
-
-
-@Command(
-    name = "uninstall",
-    description = ["Uninstall a patched APK file from the devices with the supplied ADB device serials"]
-)
-internal object UninstallCommand : Runnable {
-    @Parameters(
-        description = ["ADB device serials"],
-        arity = "1..*"
-    )
-    lateinit var deviceSerials: Array<String>
-
-    @Option(
-        names = ["-p", "--package-name"],
-        description = ["Package name to uninstall"],
-        required = true
-    )
-    lateinit var packageName: String
-
-    @Option(
-        names = ["-u", "--unmount"],
-        description = ["Uninstall by unmounting the patched package"],
-        showDefaultValue = ALWAYS
-    )
-    var unmount: Boolean = false
-
-    override fun run() = try {
-        deviceSerials.forEach {deviceSerial ->
-            if (unmount) {
-                AdbManager.RootAdbManager(deviceSerial, logger)
-            } else {
-                AdbManager.UserAdbManager(deviceSerial, logger)
-            }.uninstall(packageName)
-        }
-    } catch (e: AdbManager.DeviceNotFoundException) {
-        logger.error(e.toString())
-    }
-}

src/main/kotlin/app/revanced/cli/command/utility/InstallCommand.kt

@@ -0,0 +1,42 @@
+package app.revanced.cli.command.utility
+
+import app.revanced.utils.adb.AdbManager
+import picocli.CommandLine.*
+import java.io.File
+import java.util.logging.Logger
+
+
+@Command(
+    name = "install", description = ["Install an APK file to devices with the supplied ADB device serials"]
+)
+internal object InstallCommand : Runnable {
+    private val logger = Logger.getLogger(InstallCommand::class.java.name)
+
+    @Parameters(
+        description = ["ADB device serials"], arity = "1..*"
+    )
+    private lateinit var deviceSerials: Array<String>
+
+    @Option(
+        names = ["-a", "--apk"], description = ["APK file to be installed"], required = true
+    )
+    private lateinit var apk: File
+
+    @Option(
+        names = ["-m", "--mount"],
+        description = ["Mount the supplied APK file over the app with the supplied package name"],
+    )
+    private var packageName: String? = null
+
+    override fun run() = try {
+        deviceSerials.forEach { deviceSerial ->
+            if (packageName != null) {
+                AdbManager.RootAdbManager(deviceSerial)
+            } else {
+                AdbManager.UserAdbManager(deviceSerial)
+            }.install(AdbManager.Apk(apk, packageName))
+        }
+    } catch (e: AdbManager.DeviceNotFoundException) {
+        logger.severe(e.toString())
+    }
+}

src/main/kotlin/app/revanced/cli/command/utility/UninstallCommand.kt

@@ -0,0 +1,40 @@
+package app.revanced.cli.command.utility
+
+import app.revanced.utils.adb.AdbManager
+import picocli.CommandLine.*
+import picocli.CommandLine.Help.Visibility.ALWAYS
+import java.util.logging.Logger
+
+
+@Command(
+    name = "uninstall",
+    description = ["Uninstall a patched app from the devices with the supplied ADB device serials"]
+)
+internal object UninstallCommand : Runnable {
+    private val logger = Logger.getLogger(UninstallCommand::class.java.name)
+
+    @Parameters(description = ["ADB device serials"], arity = "1..*")
+    private lateinit var deviceSerials: Array<String>
+
+    @Option(names = ["-p", "--package-name"], description = ["Package name of the app to uninstall"], required = true)
+    private lateinit var packageName: String
+
+    @Option(
+        names = ["-u", "--unmount"],
+        description = ["Uninstall by unmounting the patched APK file"],
+        showDefaultValue = ALWAYS
+    )
+    private var unmount: Boolean = false
+
+    override fun run() = try {
+        deviceSerials.forEach { deviceSerial ->
+            if (unmount) {
+                AdbManager.RootAdbManager(deviceSerial)
+            } else {
+                AdbManager.UserAdbManager(deviceSerial)
+            }.uninstall(packageName)
+        }
+    } catch (e: AdbManager.DeviceNotFoundException) {
+        logger.severe(e.toString())
+    }
+}

src/main/kotlin/app/revanced/cli/command/utility/UtilityCommand.kt

@@ -0,0 +1,10 @@
+package app.revanced.cli.command.utility
+
+import picocli.CommandLine
+
+@CommandLine.Command(
+    name = "utility",
+    description = ["Commands for utility purposes"],
+    subcommands = [InstallCommand::class, UninstallCommand::class],
+)
+internal object UtilityCommand

src/main/kotlin/app/revanced/cli/logging/CliLogger.kt

@@ -1,8 +0,0 @@
-package app.revanced.cli.logging
-
-internal interface CliLogger {
-     fun error(msg: String)
-     fun info(msg: String)
-     fun trace(msg: String)
-     fun warn(msg: String)
-}

src/main/kotlin/app/revanced/cli/logging/impl/DefaultCliLogger.kt

@@ -1,30 +0,0 @@
-package app.revanced.cli.logging.impl
-
-import app.revanced.cli.command.MainCommand
-import app.revanced.cli.logging.CliLogger
-import java.util.logging.Logger
-import java.util.logging.SimpleFormatter
-
-internal class DefaultCliLogger(
-    private val logger: Logger = Logger.getLogger(MainCommand::class.java.name),
-    private val errorLogger: Logger = Logger.getLogger(logger.name + "Err")
-) : CliLogger {
-
-    init {
-        logger.useParentHandlers = false
-        if (logger.handlers.isEmpty()) {
-            logger.addHandler(FlushingStreamHandler(System.out, SimpleFormatter()))
-        }
-    }
-
-    companion object {
-        init {
-            System.setProperty("java.util.logging.SimpleFormatter.format", "%4\$s: %5\$s %n")
-        }
-    }
-
-    override fun error(msg: String) = errorLogger.severe(msg)
-    override fun info(msg: String) = logger.info(msg)
-    override fun trace(msg: String) = logger.finest(msg)
-    override fun warn(msg: String) = errorLogger.warning(msg)
-}

src/main/kotlin/app/revanced/cli/logging/impl/FlushingStreamHandler.kt

@@ -1,13 +0,0 @@
-package app.revanced.cli.logging.impl
-
-import java.io.OutputStream
-import java.util.logging.Formatter
-import java.util.logging.LogRecord
-import java.util.logging.StreamHandler
-
-internal class FlushingStreamHandler(out: OutputStream, format: Formatter) : StreamHandler(out, format) {
-    override fun publish(record: LogRecord) {
-        super.publish(record)
-        flush()
-    }
-}

src/main/kotlin/app/revanced/cli/patcher/logging/impl/PatcherLogger.kt

@@ -1,13 +0,0 @@
-package app.revanced.cli.patcher.logging.impl
-
-import app.revanced.cli.logging.impl.DefaultCliLogger
-import java.util.logging.Logger
-
-internal object PatcherLogger : app.revanced.patcher.logging.Logger{
-    private val logger = DefaultCliLogger(Logger.getLogger(app.revanced.patcher.Patcher::class.java.name))
-
-    override fun error(msg: String) = logger.error(msg)
-    override fun info(msg: String) = logger.info(msg)
-    override fun warn(msg: String)= logger.warn(msg)
-    override fun trace(msg: String)= logger.trace(msg)
-}

src/main/kotlin/app/revanced/utils/Options.kt

@@ -1,16 +1,18 @@
 package app.revanced.utils
 
 import app.revanced.cli.command.PatchList
-import app.revanced.cli.logging.CliLogger
 import app.revanced.patcher.extensions.PatchExtensions.options
 import app.revanced.patcher.extensions.PatchExtensions.patchName
 import app.revanced.patcher.patch.NoSuchOptionException
 import app.revanced.utils.Options.PatchOption.Option
 import com.fasterxml.jackson.module.kotlin.jacksonObjectMapper
 import java.io.File
+import java.util.logging.Logger
 
 
 internal object Options {
+    private val logger = Logger.getLogger(Options::class.java.name)
+
     private var mapper = jacksonObjectMapper()
 
     /**
@@ -53,22 +55,24 @@ internal object Options {
      * Sets the options for the patches in the list.
      *
      * @param json The JSON string containing the options.
-     * @param logger The logger to use for logging.
      */
-    fun PatchList.setOptions(json: String, logger: CliLogger? = null) {
+    fun PatchList.setOptions(json: String) {
         filter { it.options?.any() == true }.let { patches ->
             if (patches.isEmpty()) return
 
             val patchOptions = deserialize(json)
 
-            patches.forEach { patch ->
+            patches.forEach patch@{ patch ->
                 patchOptions.find { option -> option.patchName == patch.patchName }?.let {
                     it.options.forEach { option ->
                         try {
                             patch.options?.set(option.key, option.value)
-                                ?: logger?.warn("${patch.patchName} has no options")
+                                ?: run{
+                                    logger.warning("${patch.patchName} has no options")
+                                    return@patch
+                                }
                         } catch (e: NoSuchOptionException) {
-                            logger?.error(e.message ?: "Unknown error")
+                            logger.info(e.toString())
                         }
                     }
                 }
@@ -80,10 +84,9 @@ internal object Options {
      * Sets the options for the patches in the list.
      *
      * @param file The file containing the JSON string containing the options.
-     * @param logger The logger to use for logging.
      * @see setOptions
      */
-    fun PatchList.setOptions(file: File, logger: CliLogger? = null) = setOptions(file.readText(), logger)
+    fun PatchList.setOptions(file: File) = setOptions(file.readText())
 
     /**
      * Data class for a patch and its [Option]s.

src/main/kotlin/app/revanced/utils/adb/AdbManager.kt

@@ -1,36 +1,38 @@
 package app.revanced.utils.adb
 
-import app.revanced.cli.logging.CliLogger
 import app.revanced.utils.adb.AdbManager.Apk
-import app.revanced.utils.adb.Constants.COMMAND_CREATE_DIR
-import app.revanced.utils.adb.Constants.COMMAND_DELETE
-import app.revanced.utils.adb.Constants.COMMAND_INSTALL_MOUNT
-import app.revanced.utils.adb.Constants.COMMAND_PREPARE_MOUNT_APK
-import app.revanced.utils.adb.Constants.COMMAND_RESTART
-import app.revanced.utils.adb.Constants.COMMAND_UMOUNT
-import app.revanced.utils.adb.Constants.CONTENT_MOUNT_SCRIPT
-import app.revanced.utils.adb.Constants.PATH_INIT_PUSH
-import app.revanced.utils.adb.Constants.PATH_INSTALLATION
-import app.revanced.utils.adb.Constants.PATH_MOUNT
-import app.revanced.utils.adb.Constants.PATH_PATCHED_APK
+import app.revanced.utils.adb.Constants.CREATE_DIR
+import app.revanced.utils.adb.Constants.DELETE
+import app.revanced.utils.adb.Constants.INSTALLATION_PATH
+import app.revanced.utils.adb.Constants.INSTALL_MOUNT
+import app.revanced.utils.adb.Constants.INSTALL_PATCHED_APK
+import app.revanced.utils.adb.Constants.MOUNT_PATH
+import app.revanced.utils.adb.Constants.MOUNT_SCRIPT
+import app.revanced.utils.adb.Constants.PATCHED_APK_PATH
 import app.revanced.utils.adb.Constants.PLACEHOLDER
+import app.revanced.utils.adb.Constants.RESTART
+import app.revanced.utils.adb.Constants.TMP_PATH
+import app.revanced.utils.adb.Constants.UMOUNT
 import se.vidstige.jadb.JadbConnection
 import se.vidstige.jadb.managers.Package
 import se.vidstige.jadb.managers.PackageManager
 import java.io.Closeable
 import java.io.File
+import java.util.logging.Logger
 
 /**
  * Adb manager. Used to install and uninstall [Apk] files.
  *
  * @param deviceSerial The serial of the device.
  */
-internal sealed class AdbManager(deviceSerial: String? = null, protected val logger: CliLogger? = null) : Closeable {
+internal sealed class AdbManager(deviceSerial: String? = null) : Closeable {
+    protected val logger: Logger = Logger.getLogger(AdbManager::class.java.name)
+
     protected val device = JadbConnection().devices.find { device -> device.serial == deviceSerial }
         ?: throw DeviceNotFoundException(deviceSerial)
 
     init {
-        logger?.trace("Established connection to $deviceSerial")
+        logger.fine("Established connection to $deviceSerial")
     }
 
     /**
@@ -39,7 +41,7 @@ internal sealed class AdbManager(deviceSerial: String? = null, protected val log
      * @param apk The [Apk] file.
      */
     open fun install(apk: Apk) {
-        logger?.info("Finished installing ${apk.file.name}")
+        logger.info("Finished installing ${apk.file.name}")
     }
 
     /**
@@ -48,51 +50,53 @@ internal sealed class AdbManager(deviceSerial: String? = null, protected val log
      * @param packageName The package name.
      */
     open fun uninstall(packageName: String) {
-        logger?.info("Finished uninstalling $packageName")
+        logger.info("Finished uninstalling $packageName")
     }
 
     /**
      * Closes the [AdbManager] instance.
      */
     override fun close() {
-        logger?.trace("Closed")
+        logger.fine("Closed")
     }
 
-    class RootAdbManager(deviceSerial: String, logger: CliLogger? = null) : AdbManager(deviceSerial, logger) {
+    class RootAdbManager(deviceSerial: String) : AdbManager(deviceSerial) {
         init {
             if (!device.hasSu()) throw IllegalArgumentException("Root required on $deviceSerial. Task failed")
         }
 
         override fun install(apk: Apk) {
-            logger?.info("Installing by mounting")
+            logger.info("Installing by mounting")
 
             val applyReplacement = getPlaceholderReplacement(
                 apk.packageName ?: throw IllegalArgumentException("Package name is required")
             )
 
-            device.copyFile(apk.file, PATH_INIT_PUSH)
+            device.push(apk.file, TMP_PATH)
 
-            device.run("$COMMAND_CREATE_DIR $PATH_INSTALLATION")
-            device.run(COMMAND_PREPARE_MOUNT_APK.applyReplacement())
+            device.run("$CREATE_DIR $INSTALLATION_PATH")
+            device.run(INSTALL_PATCHED_APK.applyReplacement())
 
-            device.createFile(PATH_INIT_PUSH, CONTENT_MOUNT_SCRIPT.applyReplacement())
+            device.createFile(TMP_PATH, MOUNT_SCRIPT.applyReplacement())
 
-            device.run(COMMAND_INSTALL_MOUNT.applyReplacement())
-            device.run(COMMAND_UMOUNT.applyReplacement()) // Sanity check.
-            device.run(PATH_MOUNT.applyReplacement())
-            device.run(COMMAND_RESTART.applyReplacement())
+            device.run(INSTALL_MOUNT.applyReplacement())
+            device.run(UMOUNT.applyReplacement()) // Sanity check.
+            device.run(MOUNT_PATH.applyReplacement())
+            device.run(RESTART.applyReplacement())
+            device.run(DELETE.applyReplacement(TMP_PATH).applyReplacement())
 
             super.install(apk)
         }
 
         override fun uninstall(packageName: String) {
-            logger?.info("Uninstalling $packageName by unmounting and deleting the package")
+            logger.info("Uninstalling $packageName by unmounting")
 
             val applyReplacement = getPlaceholderReplacement(packageName)
 
-            device.run(COMMAND_UMOUNT.applyReplacement(packageName))
-            device.run(COMMAND_DELETE.applyReplacement(PATH_PATCHED_APK).applyReplacement())
-            device.run(COMMAND_DELETE.applyReplacement(PATH_MOUNT).applyReplacement())
+            device.run(UMOUNT.applyReplacement(packageName))
+            device.run(DELETE.applyReplacement(PATCHED_APK_PATH).applyReplacement())
+            device.run(DELETE.applyReplacement(MOUNT_PATH).applyReplacement())
+            device.run(DELETE.applyReplacement(TMP_PATH).applyReplacement())
 
             super.uninstall(packageName)
         }
@@ -103,7 +107,7 @@ internal sealed class AdbManager(deviceSerial: String? = null, protected val log
         }
     }
 
-    class UserAdbManager(deviceSerial: String, logger: CliLogger? = null) : AdbManager(deviceSerial, logger) {
+    class UserAdbManager(deviceSerial: String) : AdbManager(deviceSerial) {
         private val packageManager = PackageManager(device)
 
         override fun install(apk: Apk) {
@@ -113,7 +117,7 @@ internal sealed class AdbManager(deviceSerial: String? = null, protected val log
         }
 
         override fun uninstall(packageName: String) {
-            logger?.info("Uninstalling $packageName")
+            logger.info("Uninstalling $packageName")
 
             packageManager.uninstall(Package(packageName))
 
@@ -125,6 +129,7 @@ internal sealed class AdbManager(deviceSerial: String? = null, protected val log
      * Apk file for [AdbManager].
      *
      * @param file The [Apk] file.
+     * @param packageName The package name of the [Apk] file.
      */
     internal class Apk(val file: File, val packageName: String? = null)
 

src/main/kotlin/app/revanced/utils/adb/Commands.kt

@@ -2,24 +2,28 @@ package app.revanced.utils.adb
 
 import se.vidstige.jadb.JadbDevice
 import se.vidstige.jadb.RemoteFile
+import se.vidstige.jadb.ShellProcessBuilder
 import java.io.File
-import java.util.concurrent.Callable
-import java.util.concurrent.Executors
 
-// return the input or output stream, depending on which first returns a value
-internal fun JadbDevice.run(command: String, su: Boolean = false) = with(this.startCommand(command, su)) {
-    Executors.newFixedThreadPool(2).let { service ->
-        arrayOf(inputStream, errorStream).map { stream ->
-            Callable { stream.bufferedReader().use { it.readLine() } }
-        }.let { tasks -> service.invokeAny(tasks).also { service.shutdown() } }
-    }
+
+internal fun JadbDevice.buildCommand(command: String, su: Boolean = true): ShellProcessBuilder {
+    if (su) return shellProcessBuilder("su -c \'$command\'")
+
+    val args = command.split(" ") as ArrayList<String>
+    val cmd = args.removeFirst()
+
+    return shellProcessBuilder(cmd, *args.toTypedArray())
+}
+
+internal fun JadbDevice.run(command: String, su: Boolean = true): Int {
+    return this.buildCommand(command, su).start().waitFor()
 }
 
 internal fun JadbDevice.hasSu() =
     this.startCommand("su -h", false).waitFor() == 0
 
-internal fun JadbDevice.copyFile(file: File, targetFile: String) =
-    push(file, RemoteFile(targetFile))
+internal fun JadbDevice.push(file: File, targetFilePath: String) =
+    push(file, RemoteFile(targetFilePath))
 
 internal fun JadbDevice.createFile(targetFile: String, content: String) =
     push(content.byteInputStream(), System.currentTimeMillis(), 644, RemoteFile(targetFile))

src/main/kotlin/app/revanced/utils/adb/Constants.kt

@@ -1,40 +1,40 @@
 package app.revanced.utils.adb
 
 internal object Constants {
-    internal const val PLACEHOLDER = "TEMPLATE_PACKAGE_NAME"
+    internal const val PLACEHOLDER = "PLACEHOLDER"
 
-    internal const val PATH_INIT_PUSH = "/data/local/tmp/revanced.delete"
-    internal const val PATH_INSTALLATION = "/data/adb/revanced/"
-    internal const val PATH_PATCHED_APK = "$PATH_INSTALLATION$PLACEHOLDER.apk"
-    internal const val PATH_MOUNT = "/data/adb/service.d/mount_revanced_$PLACEHOLDER.sh"
+    internal const val TMP_PATH = "/data/local/tmp/revanced.tmp"
+    internal const val INSTALLATION_PATH = "/data/adb/revanced/"
+    internal const val PATCHED_APK_PATH = "$INSTALLATION_PATH$PLACEHOLDER.apk"
+    internal const val MOUNT_PATH = "/data/adb/service.d/mount_revanced_$PLACEHOLDER.sh"
 
-    internal const val COMMAND_DELETE = "rm -rf $PLACEHOLDER"
-    internal const val COMMAND_CREATE_DIR = "mkdir -p"
-    internal const val COMMAND_RESTART = "pm resolve-activity --brief $PLACEHOLDER | tail -n 1 | " +
+    internal const val DELETE = "rm -rf $PLACEHOLDER"
+    internal const val CREATE_DIR = "mkdir -p"
+    internal const val RESTART = "pm resolve-activity --brief $PLACEHOLDER | tail -n 1 | " +
             "xargs am start -n && kill ${'$'}(pidof -s $PLACEHOLDER)"
 
-    internal const val COMMAND_PREPARE_MOUNT_APK = "base_path=\"$PATH_PATCHED_APK\" && " +
-            "mv $PATH_INIT_PUSH ${'$'}base_path && " +
+    internal const val INSTALL_PATCHED_APK = "base_path=\"$PATCHED_APK_PATH\" && " +
+            "mv $TMP_PATH ${'$'}base_path && " +
             "chmod 644 ${'$'}base_path && " +
             "chown system:system ${'$'}base_path && " +
             "chcon u:object_r:apk_data_file:s0  ${'$'}base_path"
 
-    internal const val COMMAND_UMOUNT =
+    internal const val UMOUNT =
         "grep $PLACEHOLDER /proc/mounts | while read -r line; do echo ${'$'}line | cut -d \" \" -f 2 | sed 's/apk.*/apk/' | xargs -r umount -l; done"
 
-    internal const val COMMAND_INSTALL_MOUNT = "mv $PATH_INIT_PUSH $PATH_MOUNT && chmod +x $PATH_MOUNT"
+    internal const val INSTALL_MOUNT = "mv $TMP_PATH $MOUNT_PATH && chmod +x $MOUNT_PATH"
 
-    internal const val CONTENT_MOUNT_SCRIPT =
+    internal val MOUNT_SCRIPT =
         """
             #!/system/bin/sh
             MAGISKTMP="${'$'}(magisk --path)" || MAGISKTMP=/sbin
             MIRROR="${'$'}MAGISKTMP/.magisk/mirror"
             while [ "${'$'}(getprop sys.boot_completed | tr -d '\r')" != "1" ]; do sleep 1; done
             
-            base_path="$PATH_PATCHED_APK"
+            base_path="$PATCHED_APK_PATH"
             stock_path=${'$'}( pm path $PLACEHOLDER | grep base | sed 's/package://g' )
 
             chcon u:object_r:apk_data_file:s0  ${'$'}base_path
             mount -o bind ${'$'}MIRROR${'$'}base_path ${'$'}stock_path
-        """
+        """.trimIndent()
 }

src/main/kotlin/app/revanced/utils/signing/ApkSigner.kt

@@ -1,6 +1,5 @@
 package app.revanced.utils.signing
 
-import app.revanced.cli.command.logger
 import com.android.apksig.ApkSigner
 import org.bouncycastle.asn1.x500.X500Name
 import org.bouncycastle.asn1.x509.SubjectPublicKeyInfo
@@ -16,10 +15,13 @@ import java.math.BigInteger
 import java.security.*
 import java.security.cert.X509Certificate
 import java.util.*
+import java.util.logging.Logger
 
 internal class ApkSigner(
     private val signingOptions: SigningOptions
 ) {
+    private val logger = Logger.getLogger(ApkSigner::class.java.name)
+
     private val signer: ApkSigner.Builder
     private val passwordCharArray = signingOptions.password.toCharArray()